rfmm_40918.1

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Basic information about the TSS


TSS ID:rfmm_40918.1
Species:mouse
Chr:chr4
Start:141345308
End:141345367
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2759720,EM10E1137492)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC025833:0
AK154809:0
GeneID:213989
HGNC/MGI_ID:MGI:2384869
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000156246.2:16
  • AK162322:16
  • ENSMUST00000053263.9:-182
view more...
Gene_name:transmembrane protein 82
Gene_symbol:Tmem82
Gene_synonyms:
Gene_source:MGI:2384869



TATA-Box annotation


Distance to TSS:607
Nearest PromoterID:NR_151462.1
Entrez ID:Tmem82
Nearest Unigene:NM_145987
Nearest Refseq:
Nearest Ensembl:
Gene Name:transmembrane protein 82
Gene Alias:
Gene Type:
CpG%:0.067797
GC%:0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.