rfmm_41963.1

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Basic information about the TSS


TSS ID:rfmm_41963.1
Species:mouse
Chr:chr4
Start:151460887
End:151460939
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1894764,EM10E0778768)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000129097.2:0
AK016376:0
AK017048:0
GeneID:67748
HGNC/MGI_ID:MGI:1914998
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RIKEN cDNA 4930589P08 gene
    Gene_symbol:4930589P08Rik
    Gene_synonyms:
    Gene_source:MGI:1914998



    TATA-Box annotation


    Distance to TSS:-79689
    Nearest PromoterID:XR_003955321.2
    Entrez ID:Gm30344
    Nearest Unigene:XR_003955321
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RIKEN cDNA 4930589P08 gene
    Gene Alias:
    Gene Type:
    CpG%:0.115385
    GC%:0.528302
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.