rfmm_43908.1

Basic information about the TSS

TSS ID:	rfmm_43908.1
TSS ID(Version3):	mm_44738.1 mm_44737.1
Species:	mouse
Chr:	chr5

Start:	31337240
End:	31337502
Strand:	-

Source datasets

FANTOM5|PRJDB10397|DRA000914|GSE117655

Protocol

CAGE|C1CAGE|CAGE_and_CAGEscan|deepCAGE

TSS cluster detected^*

4

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D1909597,EM10E0784497)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000101411.6:0 ENSMUST00000202254.4:0 ENSMUST00000088010.12:0 ENSMUST00000202639.4:0 ENSMUST00000202843.4:0 ENSMUST00000202218.4:0 ENSMUST00000201468.4:0 AK138760:0 BC043100:0 AK149771:0 AK159938:0 AK154056:0 AK151300:0 AK083585:0 BC034369:0 AK004895:0 AK083636:0 AK152439:0 AK043944:0 AK035792:0 AK088596:0
GeneID:	71752
HGNC/MGI_ID:	MGI:1919002 MGI:5580315
UniProt_ID:	D3Z2L1 D3Z7I0 Q3UU56 Q8BL74
Nearer transcript ids and distances:	ENSMUST00000201428.2:47

Gene_name:	general transcription factor IIIC, polypeptide 2, beta; predicted gene 29609
Gene_symbol:	Gm29609 Gtf3c2
Gene_synonyms:	1300004C11Rik 2610510G03Rik TFIIIC-BETA TFIIIC110
Gene_source:	MGI:1919002 MGI:5580315

TATA-Box annotation

Distance to TSS:	117
Nearest PromoterID:	NM_027901.2
Entrez ID:	Gtf3c2
Nearest Unigene:	NM_027901
Nearest Refseq:
Nearest Ensembl:
Gene Name:	general transcription factor IIIC, polypeptide 2, beta; predicted gene 29609
Gene Alias:
Gene Type:
CpG%:	0.103053
GC%:	0.600760
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):	110(GAGTTTAAAAGA,-,0.00)

TSS expression

Expression data not found.