rfmm_43922.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_43922.1
TSS ID(Version3):mm_171876.1
Species:mouse
Chr:chr5
Start:31363448
End:31363522
Strand:-
Source datasetsDRA000914|PRJDB10397
ProtocolCAGE_and_CAGEscan|C1CAGE
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK183059:49
GeneID:14208
HGNC/MGI_ID:MGI:106065
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
    Gene_symbol:Ppm1g
    Gene_synonyms:Fin13
    Gene_source:MGI:106065



    TATA-Box annotation


    Distance to TSS:-3478
    Nearest PromoterID:XM_006503657.3
    Entrez ID:Zfp513
    Nearest Unigene:XM_006503657
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
    Gene Alias:
    Gene Type:
    CpG%:0.040541
    GC%:0.600000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.