rfmm_44202.1

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Basic information about the TSS


TSS ID:rfmm_44202.1
Species:mouse
Chr:chr5
Start:34326369
End:34326379
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2774025,EM10E1143599)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC025497:-384
GeneID:231123
HGNC/MGI_ID:MGI:2387633
UniProt_ID:
Nearer transcript ids and distances:
  • NM_146159.1:-389
  • BC027393:-389
  • ENSMUST00000202409.2:-391
  • BC141101:-391
  • BC145378:-391
  • ENSMUST00000202541.2:-398
  • AK133063:-410
  • BC023882:-410
  • ENSMUST00000202638.4:-413
  • ENSMUST00000042954.11:-413
  • ENSMUST00000201069.2:-413
  • AY135562:-413
  • AK049414:-413
  • ENSMUST00000202290.2:-417
  • ENSMUST00000202042.2:-468
  • NM_001289804.1:-491
  • NM_181857.4:-491
  • NM_001289803.1:-491
  • ENSMUST00000060049.8:-492
view more...
Gene_name:HAUS augmin-like complex, subunit 3
Gene_symbol:Haus3
Gene_synonyms:D4S43h D5H4S43 D5H4S43E
Gene_source:MGI:2387633



TATA-Box annotation


Distance to TSS:394
Nearest PromoterID:NM_146159.1
Entrez ID:Haus3
Nearest Unigene:NM_146159
Nearest Refseq:
Nearest Ensembl:
Gene Name:HAUS augmin-like complex, subunit 3
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.545455
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "NM_146159.1:-389 BC027393:-389 ENSMUST00000202409.2:-391 BC141101:-391 BC145378:-391 ENSMUST00000202541.2:-398 AK133063:-410 BC023882:-410 ENSMUST00000202638.4:-413 ENSMUST00000042954.11:-413 ENSMUST00000201069.2:-413 AY135562:-413 AK049414:-413 ENSMUST00000202290.2:-417 ENSMUST00000202042.2:-468 NM_001289804.1:-491 NM_181857.4:-491 NM_001289803.1:-491 ENSMUST00000060049.8:-492" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.