rfmm_46883.1

Basic information about the TSS

TSS ID:	rfmm_46883.1
Species:	mouse
Chr:	chr5

Start:	90907209
End:	90907226
Strand:	+

Source datasets

GSE117655|DRA000914

Protocol

deepCAGE|CAGE_and_CAGEscan

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2787330,EM10E1148338)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000202380.2:0 AK044397:0 AK156787:0
GeneID:	20311
HGNC/MGI_ID:	MGI:1096868
UniProt_ID:
Nearer transcript ids and distances:	ENSMUST00000031318.6:11 U27267:11 BC024392:19 NM_009141.3:-52 LF195018:-53 MA430595:-53 LF203646:90 MA439223:90 view more...

Gene_name:	chemokine (C-X-C motif) ligand 5
Gene_symbol:	Cxcl5
Gene_synonyms:	AMCF-II Cxcl6 ENA-78 GCP-2 LIX Scyb5 Scyb6 granulocyte_chemotactic_protein-2
Gene_source:	MGI:1096868

TATA-Box annotation

Distance to TSS:	60
Nearest PromoterID:	NM_009141.3
Entrez ID:	Cxcl5
Nearest Unigene:	NM_009141
Nearest Refseq:
Nearest Ensembl:
Gene Name:	chemokine (C-X-C motif) ligand 5
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.444444
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.