rfmm_47985.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_47985.1
Species:mouse
Chr:chr5
Start:105557208
End:105557239
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2791545,EM10E1150044)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000196818.2:0
AK051451:0
GeneID:75827
HGNC/MGI_ID:MGI:1923077 MGI:5591210
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RIKEN cDNA 4930542N06 gene; predicted gene, 32051
    Gene_symbol:4930542N06Rik Gm32051
    Gene_synonyms:Gm42749
    Gene_source:MGI:1923077 MGI:5591210



    TATA-Box annotation


    Distance to TSS:9
    Nearest PromoterID:XR_389452.2
    Entrez ID:Gm32051
    Nearest Unigene:XR_389452
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RIKEN cDNA 4930542N06 gene; predicted gene, 32051
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.593750
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.