rfmm_487.1

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Basic information about the TSS


TSS ID:rfmm_487.1
Species:mouse
Chr:chr1
Start:19173256
End:19173267
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1041563,EM10E0432623)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001379074.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000037294.8:-10
  • NM_153154.3:-10
  • AK132112:-10
  • AF421891:-10
  • BC152324:30
  • BC152325:30
  • BC160252:207
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_001379074.1
Entrez ID:Tfap2d
Nearest Unigene:NM_001379074
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.416667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):