rfmm_49013.1

Basic information about the TSS

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TSS ID: rfmm_49013.1 Species: mouse Chr: chr5		Start: 115257337 End: 115257404 Strand: -
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D2795970,EM10E1152232)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000131726.8:0 ENSMUST00000153374.2:0 BC055063:0 BC016259:0 AK169428:0 AK155361:0 GeneID: 11409 HGNC/MGI_ID: MGI:87868 UniProt_ID: Nearer transcript ids and distances: ENSMUST00000031524.11:-1 NM_007383.3:-1 LF195114:-2 MA430691:-2 ENSMUST00000141142.2:3 L11163:8 view more...

Gene_name: acyl-Coenzyme A dehydrogenase, short chain Gene_symbol: Acads Gene_synonyms: Bcd-1 Bcd1 Hdlq8 SCAD Gene_source: MGI:87868

TATA-Box annotation

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Distance to TSS:	35
Nearest PromoterID:	NM_007383.3
Entrez ID:	Acads
Nearest Unigene:	NM_007383
Nearest Refseq:
Nearest Ensembl:
Gene Name:	acyl-Coenzyme A dehydrogenase, short chain
Gene Alias:
Gene Type:
CpG%:	0.044776
GC%:	0.720588
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.