rfmm_49941.1

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Basic information about the TSS


TSS ID:rfmm_49941.1
Species:mouse
Chr:chr5
Start:122652058
End:122652086
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:dELS (EM10D2799929,EM10E1154277)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK006664:0
GeneID:102635658
HGNC/MGI_ID:MGI:1920518
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RIKEN cDNA 1700040P09 gene
    Gene_symbol:1700040P09Rik
    Gene_synonyms:
    Gene_source:MGI:1920518



    TATA-Box annotation


    Distance to TSS:4
    Nearest PromoterID:XR_387696.4
    Entrez ID:1700040P09Rik
    Nearest Unigene:XR_387696
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RIKEN cDNA 1700040P09 gene
    Gene Alias:
    Gene Type:
    CpG%:0.071429
    GC%:0.724138
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.