rfmm_50860.1

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Basic information about the TSS


TSS ID:rfmm_50860.1
Species:mouse
Chr:chr5
Start:134299569
End:134299572
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D1960654,EM10E0806076)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000201715.2:-18
AK053622:-18
GeneID:14886
HGNC/MGI_ID:MGI:1202722 MGI:5663618
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:general transcription factor II I; predicted gene 43481
    Gene_symbol:Gm43481 Gtf2i
    Gene_synonyms:6030441I21Rik BAP-135 TFII-I
    Gene_source:MGI:1202722 MGI:5663618



    TATA-Box annotation


    Distance to TSS:-41091
    Nearest PromoterID:NR_104383.1
    Entrez ID:Ncf1
    Nearest Unigene:NR_104383
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:general transcription factor II I; predicted gene 43481
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.