rfmm_51598.1

Basic information about the TSS

TSS ID:	rfmm_51598.1
TSS ID(Version3):	mm_43560.1 mm_43561.1
Species:	mouse
Chr:	chr5

Start:	137627412
End:	137627464
Strand:	+

Source datasets

FANTOM5|EPD|DRA000914|PRJDB10397|GSE117655

Protocol

CAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE

TSS cluster detected^*

5

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000177477.2:0 ENSMUST00000177545.2:0 ENSMUST00000176011.8:0 ENSMUST00000176667.8:0 BC012525:0 AK088331:0 AK131167:0
GeneID:	231798
HGNC/MGI_ID:	MGI:1917193 MGI:5306917
UniProt_ID:	H3BJU9 H3BLB4 H3BLL3 Q6KAP0 Q8C2M4 Q921G6
Nearer transcript ids and distances:	ENSMUST00000176988.8:-7 NM_001168652.1:-27 NM_146164.2:-27 NR_033148.1:-27 ENSMUST00000031734.16:-29 AK194887:37 AK213916:191 view more...

Gene_name:	leucine-rich repeats and calponin homology (CH) domain containing 4; predicted gene 20605
Gene_symbol:	Gm20605 Lrch4
Gene_synonyms:	2810008P14Rik 2900069C24Rik LRN LRRN4 SAP25
Gene_source:	MGI:1917193 MGI:5306917

TATA-Box annotation

Distance to TSS:	53
Nearest PromoterID:	NM_001168652.1
Entrez ID:	Lrch4
Nearest Unigene:	NM_001168652
Nearest Refseq:
Nearest Ensembl:
Gene Name:	leucine-rich repeats and calponin homology (CH) domain containing 4; predicted gene 20605
Gene Alias:
Gene Type:
CpG%:	0.115385
GC%:	0.754717
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.