rfmm_51608.1

Basic information about the TSS

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TSS ID: rfmm_51608.1 TSS ID(Version3): mm_43570.1 Species: mouse Chr: chr5		Start: 137639526 End: 137639597 Strand: +
Source datasets	FANTOM5|DRA000914|PRJDB10397
Protocol	CAGE|CAGE_and_CAGEscan|C1CAGE
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2806419,EM10E1157428)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000177466.8:0 GeneID: 751865 HGNC/MGI_ID: MGI:3802945 UniProt_ID: H3BLC5 Nearer transcript ids and distances: ENSMUST00000166099.3:102 NM_001081962.2:138 AM275337:138 ENSMUST00000177354.2:160 AK164339:-450 view more...

Gene_name: sin3 associated polypeptide Gene_symbol: Sap25 Gene_synonyms: 25_kDa Gene_source: MGI:3802945

TATA-Box annotation

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Distance to TSS:	-174
Nearest PromoterID:	NM_001081962.2
Entrez ID:	Sap25
Nearest Unigene:	NM_001081962
Nearest Refseq:
Nearest Ensembl:
Gene Name:	sin3 associated polypeptide
Gene Alias:
Gene Type:
CpG%:	0.098592
GC%:	0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.