rfmm_51719.1

Basic information about the TSS

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TSS ID: rfmm_51719.1 TSS ID(Version3): mm_171816.1 mm_43620.1 mm_43621.1 Species: mouse Chr: chr5		Start: 138159333 End: 138159406 Strand: +
Source datasets	FANTOM5|DRA000914|GSE117655|PRJDB10397
Protocol	CAGE|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*	4

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D2806702,EM10E1157600)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000019638.15:0 ENSMUST00000110951.8:0 ENSMUST00000127881.8:0 AK146775:0 AF071315:0 AK146410:0 BC004664:0 BC014286:0 GeneID: 26893 HGNC/MGI_ID: MGI:1349439 UniProt_ID: D3Z0F5 Q3UIT2 Nearer transcript ids and distances: ENSMUST00000154867.2:25 AK138409:25 LF279945:273 MA515522:273 view more...

Gene_name: COP9 signalosome subunit 6 Gene_symbol: Cops6 Gene_synonyms: COP9_complex_S6 Sgn3 VIP/MOV34 Gene_source: MGI:1349439

TATA-Box annotation

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Distance to TSS:	5
Nearest PromoterID:	NM_012002.3
Entrez ID:	Cops6
Nearest Unigene:	NM_012002
Nearest Refseq:
Nearest Ensembl:
Gene Name:	COP9 signalosome subunit 6
Gene Alias:
Gene Type:
CpG%:	0.136986
GC%:	0.756757
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.