rfmm_53320.1

Basic information about the TSS

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TSS ID: rfmm_53320.1 Species: mouse Chr: chr6		Start: 6955994 End: 6956049 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2814346,EM10E1161087)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000040826.6:0 ENSMUST00000123848.2:0 AK046436:0 AK016986:0 BC118928:0 BC061217:0 BC118927:0 AK002229:0 AK028031:0 GeneID: 71238 HGNC/MGI_ID: MGI:1913288 UniProt_ID: Q0VF92 Nearer transcript ids and distances: AK004417:39

Gene_name: succinate dehydrogenase complex assembly factor 3 Gene_symbol: Sdhaf3 Gene_synonyms: 0610005M07Rik 4933430A16Rik Acn9 Gene_source: MGI:1913288

TATA-Box annotation

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Distance to TSS:	3
Nearest PromoterID:	NM_001077713.1
Entrez ID:	Sdhaf3
Nearest Unigene:	XM_030255595
Nearest Refseq:
Nearest Ensembl:
Gene Name:	succinate dehydrogenase complex assembly factor 3
Gene Alias:
Gene Type:
CpG%:	0.145455
GC%:	0.696429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.