rfmm_5401.1

Basic information about the TSS

TSS ID:	rfmm_5401.1
Species:	mouse
Chr:	chr1

Start:	118238894
End:	118238951
Strand:	-

Source datasets

PRJDB10397|GSE117655|DRA000914

Protocol

C1CAGE|deepCAGE|CAGE_and_CAGEscan

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2286868,EM10E0941565)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AK165598:0 AK150529:0 BC004615:0 AK151448:0 AK011220:0
GeneID:	22099
HGNC/MGI_ID:	MGI:109263
UniProt_ID:
Nearer transcript ids and distances:	ENSMUST00000188882.2:-15 AF234179:32 X81464:32 AK010737:35 AK181409:66 AK183078:66 AK184665:66 AK189586:66 AK193617:66 AK198107:66 AK199692:66 AK202525:66 NM_011650.4:-125 ENSMUST00000027623.9:-195 ENSMUST00000189768.7:-241 NR_153836.1:436 view more...

Gene_name:	translin
Gene_symbol:	Tsn
Gene_synonyms:	2610034C24Rik TB-RBP
Gene_source:	MGI:109263

TATA-Box annotation

Distance to TSS:	154
Nearest PromoterID:	NM_011650.4
Entrez ID:	Tsn
Nearest Unigene:	NM_011650
Nearest Refseq:
Nearest Ensembl:
Gene Name:	translin
Gene Alias:
Gene Type:
CpG%:	0.105263
GC%:	0.724138
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.