rfmm_56754.1

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Basic information about the TSS


TSS ID:rfmm_56754.1
Species:mouse
Chr:chr6
Start:59403265
End:59403330
Strand:-
Source datasetsGSE117655|DRA000914
ProtocoldeepCAGE|CAGE_and_CAGEscan
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2828362,EM10E1166523)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000051065.6:0
AK173336:0
AK050148:0
GeneID:243385
HGNC/MGI_ID:MGI:1924785
UniProt_ID:B2RQZ6
Nearer transcript ids and distances:
    Gene_name:GPRIN family member 3
    Gene_symbol:Gprin3
    Gene_synonyms:C030038J10Rik
    Gene_source:MGI:1924785



    TATA-Box annotation


    Distance to TSS:-6
    Nearest PromoterID:NM_183183.3
    Entrez ID:Gprin3
    Nearest Unigene:XM_006506084
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:GPRIN family member 3
    Gene Alias:
    Gene Type:
    CpG%:0.076923
    GC%:0.621212
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.