rfmm_57021.1

Basic information about the TSS

TSS ID:	rfmm_57021.1
Species:	mouse
Chr:	chr6

Start:	68279393
End:	68279394
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2000573,EM10E0823090)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000103322.3:17
GeneID:
HGNC/MGI_ID:	MGI:3642626
UniProt_ID:	A0A075B5K6
Nearer transcript ids and distances:	Z49934:29 M92339:437 EU568254:447 S65994:447 AY309010:447 M92328:447 M92330:447 AB100164:447 AB100165:447 AB678411:447 AY484431:447 AY625280:447 S60947:447 S74547:447 X76017:447 JX492472:447 U80187:450 Z11915:457 GU563173:467 JX492357:468 AB793512:471 EU568267:472 EU568236:477 view more...

Gene_name:	immunoglobulin kappa variable 2-109
Gene_symbol:	Igkv2-109
Gene_synonyms:	ENSMUSG00000060986
Gene_source:	MGI:3642626

TATA-Box annotation

Distance to TSS:	-30
Nearest PromoterID:	id-Igkv2-109
Entrez ID:	Igkv2-109
Nearest Unigene:	id-Igkv2-109
Nearest Refseq:
Nearest Ensembl:
Gene Name:	immunoglobulin kappa variable 2-109
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "Z49934:29 M92339:437 EU568254:447 S65994:447 AY309010:447 M92328:447 M92330:447 AB100164:447 AB100165:447 AB678411:447 AY484431:447 AY625280:447 S60947:447 S74547:447 X76017:447 JX492472:447 U80187:450 Z11915:457 GU563173:467 JX492357:468 AB793512:471 EU568267:472 EU568236:477" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.