rfmm_57149.1

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Basic information about the TSS


TSS ID:rfmm_57149.1
Species:mouse
Chr:chr6
Start:70703595
End:70703603
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2000895,EM10E0823151)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:U17383:-171
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AJ294736:-174
  • DQ140176:-176
  • S76258:-176
  • BC002112:-176
  • V00802:-176
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:180
Nearest PromoterID:id-Igkc
Entrez ID:Igkc
Nearest Unigene:id-Igkc
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.444444
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):