rfmm_59431.1

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Basic information about the TSS


TSS ID:rfmm_59431.1
Species:mouse
Chr:chr6
Start:106771579
End:106771597
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:dELS (EM10D2840699,EM10E1171447)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF287553:280
MA523130:280
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF287552:327
  • MA523129:327
  • LF287555:-434
  • MA523132:-434
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:5460
Nearest PromoterID:NM_175357.3
Entrez ID:Crbn
Nearest Unigene:NM_021449
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.578947
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):