rfmm_61538.1

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Basic information about the TSS


TSS ID:rfmm_61538.1
Species:mouse
Chr:chr6
Start:127538171
End:127538204
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2848347,EM10E1174984)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001033464.4:95
NM_001368877.1:95
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000212051.2:97
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-112
Nearest PromoterID:NM_001368877.1
Entrez ID:Cracr2a
Nearest Unigene:NM_001033464
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.030303
GC%:0.441176
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):