rfmm_63570.1

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Basic information about the TSS


TSS ID:rfmm_63570.1
Species:mouse
Chr:chr7
Start:6366324
End:6366324
Strand:+
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2856528,EM10E1178454)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC085322:3
GeneID:330463
HGNC/MGI_ID:MGI:107783
UniProt_ID:Q5U406
Nearer transcript ids and distances:
  • ENSMUST00000208763.2:7
  • ENSMUST00000208030.2:11
  • AK039658:11
  • ENSMUST00000208390.2:-15
  • AK163133:-15
  • NM_001112805.1:-17
  • NM_001025163.1:-17
  • NM_177888.4:-17
  • ENSMUST00000207347.2:-45
  • AK134974:-45
  • LF196040:-46
  • MA431617:-46
  • ENSMUST00000207314.2:55
  • AK173164:55
  • LF291028:204
  • MA526605:204
view more...
Gene_name:zinc finger protein 78
Gene_symbol:Zfp78
Gene_synonyms:KRAB12 Zfp77
Gene_source:MGI:107783



TATA-Box annotation


Distance to TSS:17
Nearest PromoterID:NM_001025163.1
Entrez ID:Zfp78
Nearest Unigene:NM_001025163
Nearest Refseq:
Nearest Ensembl:
Gene Name:zinc finger protein 78
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "ENSMUST00000208763.2:7 ENSMUST00000208030.2:11 AK039658:11 ENSMUST00000208390.2:-15 AK163133:-15 NM_001112805.1:-17 NM_001025163.1:-17 NM_177888.4:-17 ENSMUST00000207347.2:-45 AK134974:-45 LF196040:-46 MA431617:-46 ENSMUST00000207314.2:55 AK173164:55 LF291028:204 MA526605:204" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.