rfmm_64290.1

Basic information about the TSS

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TSS ID: rfmm_64290.1 TSS ID(Version3): mm_58995.1 Species: mouse Chr: chr7		Start: 18883718 End: 18883834 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|GSE117655|PRJDB10397
Protocol	CAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*	5

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D2858235,EM10E1179272)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000206766.2:0 BC043014:0 BC116858:0 BC116860:0 AK088105:0 AK007389:0 AK045968:0 BC051208:0 GeneID: 107686 HGNC/MGI_ID: MGI:98345 UniProt_ID: Nearer transcript ids and distances: ENSMUST00000049294.4:-71

Gene_name: small nuclear ribonucleoprotein D2 Gene_symbol: Snrpd2 Gene_synonyms: 1810009A06Rik SMD2 Gene_source: MGI:98345

TATA-Box annotation

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Distance to TSS:	13
Nearest PromoterID:	NM_026943.1
Entrez ID:	Snrpd2
Nearest Unigene:	XM_030241969
Nearest Refseq:
Nearest Ensembl:
Gene Name:	small nuclear ribonucleoprotein D2
Gene Alias:
Gene Type:
CpG%:	0.094828
GC%:	0.658120
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.