rfmm_64378.1

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Basic information about the TSS


TSS ID:rfmm_64378.1
TSS ID(Version3):mm_65117.1
mm_65116.1
Species:mouse
Chr:chr7
Start:19093342
End:19093413
Strand:-
Source datasetsFANTOM5|PRJDB10397|GSE117655|DRA000914
ProtocolCAGE|C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2858407,EM10E1179389)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000047036.10:0
ENSMUST00000176333.2:0
BC029206:0
BC071199:0
AB091121:0
BC016115:0
AK011811:0
GeneID:70333
HGNC/MGI_ID:MGI:1917583
UniProt_ID:A0PJ57 Q76KJ5
Nearer transcript ids and distances:
    Gene_name:RNA polymerase I subunit G
    Gene_symbol:Polr1g
    Gene_synonyms:2610103M17Rik Ase1 Cd3eap PAF49
    Gene_source:MGI:1917583



    TATA-Box annotation


    Distance to TSS:31
    Nearest PromoterID:NM_145822.2
    Entrez ID:Cd3eap
    Nearest Unigene:NM_145822
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RNA polymerase I subunit G
    Gene Alias:
    Gene Type:
    CpG%:0.112676
    GC%:0.750000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.