rfmm_65081.1

Basic information about the TSS

TSS ID:	rfmm_65081.1
TSS ID(Version3):	mm_65485.1
Species:	mouse
Chr:	chr7

Start:	25358152
End:	25358193
Strand:	-

Source datasets

FANTOM5|EPD|DRA000914|PRJDB10397|GSE117655

Protocol

CAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE

TSS cluster detected^*

5

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2859754,EM10E1180180)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	BC003787:0 L47335:0 AK002435:0 AK154734:0
GeneID:	12039
HGNC/MGI_ID:	MGI:107701
UniProt_ID:	P50136 Q3U3J1 Q99L69
Nearer transcript ids and distances:	LF291588:118 MA527165:118 ENSMUST00000071329.8:-213 LF196127:-214 MA431704:-214 LF291587:244 MA527164:244 LF291586:418 MA527163:418 view more...

Gene_name:	branched chain ketoacid dehydrogenase E1, alpha polypeptide
Gene_symbol:	Bckdha
Gene_synonyms:	BCKAD_E1[a]
Gene_source:	MGI:107701

TATA-Box annotation

Distance to TSS:	14
Nearest PromoterID:	NM_007533.5
Entrez ID:	Bckdha
Nearest Unigene:	XM_036152613
Nearest Refseq:
Nearest Ensembl:
Gene Name:	branched chain ketoacid dehydrogenase E1, alpha polypeptide
Gene Alias:
Gene Type:
CpG%:	0.024390
GC%:	0.452381
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.