rfmm_6554.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_6554.1
Species:mouse
Chr:chr1
Start:134038972
End:134038986
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2291485,EM10E0943608)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000159963.8:0
ENSMUST00000160060.8:0
AY458654:0
AK009012:0
GeneID:71884
HGNC/MGI_ID:MGI:1919134
UniProt_ID:B2RS82 Q9D7Q1
Nearer transcript ids and distances:
  • BC138765:28
Gene_name:chitinase 1 (chitotriosidase)
Gene_symbol:Chit1
Gene_synonyms:2300002L19Rik
Gene_source:MGI:1919134



TATA-Box annotation


Distance to TSS:-1
Nearest PromoterID:NM_027979.2
Entrez ID:Chit1
Nearest Unigene:XM_006529880
Nearest Refseq:
Nearest Ensembl:
Gene Name:chitinase 1 (chitotriosidase)
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.400000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.