rfmm_66875.1

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Basic information about the TSS


TSS ID:rfmm_66875.1
TSS ID(Version3):mm_60184.1
Species:mouse
Chr:chr7
Start:42863427
End:42863481
Strand:+
Source datasetsFANTOM5|EPD|DRA000914|PRJDB10397
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2054202,EM10E0847448)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000205748.2:0
ENSMUST00000206405.2:0
ENSMUST00000205291.2:0
EU599041:0
EU599042:0
GeneID:100170401
HGNC/MGI_ID:MGI:3796554
UniProt_ID:B2M0R7 B2M0R8
Nearer transcript ids and distances:
    Gene_name:expressed sequence EU599041
    Gene_symbol:EU599041
    Gene_synonyms:
    Gene_source:MGI:3796554



    TATA-Box annotation


    Distance to TSS:-9
    Nearest PromoterID:NM_001177525.1
    Entrez ID:EU599041
    Nearest Unigene:NM_001177525
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:expressed sequence EU599041
    Gene Alias:
    Gene Type:
    CpG%:0.018519
    GC%:0.581818
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.