rfmm_67100.1

Basic information about the TSS

TSS ID:	rfmm_67100.1
TSS ID(Version3):	mm_60329.1
Species:	mouse
Chr:	chr7

Start:	43896177
End:	43896220
Strand:	+

Source datasets

FANTOM5|EPD|DRA000914|GSE117655|PRJDB10397

Protocol

CAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE

TSS cluster detected^*

5

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2865044,EM10E1182680)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000185481.7:0 ENSMUST00000125318.3:0 ENSMUST00000144905.3:0 ENSMUST00000146155.8:0 ENSMUST00000107949.8:0 ENSMUST00000084937.11:0 ENSMUST00000107950.9:0 ENSMUST00000107948.8:0 AK165177:0 AK169836:0 AK049154:0 AK010334:0 AK169796:0 AK172418:0 AK162303:0 BC016099:0
GeneID:	668661
HGNC/MGI_ID:	MGI:1914226 MGI:5579202
UniProt_ID:	A0A087WPT9 D3Z520 Q3T9M2 Q3TE80
Nearer transcript ids and distances:	ENSMUST00000136210.3:1 ENSMUST00000187524.7:3 ENSMUST00000138978.8:4 ENSMUST00000188476.7:12 ENSMUST00000188111.7:-18 ENSMUST00000187581.7:22 ENSMUST00000137702.8:-25 ENSMUST00000137742.8:-27 AK036099:-27 ENSMUST00000055858.14:-31 NM_025880.4:-31 AK169789:-31 ENSMUST00000145653.8:435 view more...

Gene_name:	RIKEN cDNA 2410002F23 gene; predicted gene 28496
Gene_symbol:	2410002F23Rik Gm28496
Gene_synonyms:
Gene_source:	MGI:1914226 MGI:5579202

TATA-Box annotation

Distance to TSS:	22
Nearest PromoterID:	XM_030242907.1
Entrez ID:	2410002F23Rik
Nearest Unigene:	XM_030242907
Nearest Refseq:
Nearest Ensembl:
Gene Name:	RIKEN cDNA 2410002F23 gene; predicted gene 28496
Gene Alias:
Gene Type:
CpG%:	0.186047
GC%:	0.727273
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):	1(CGCTATAAATGG,-,0.00)

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "ENSMUST00000136210.3:1 ENSMUST00000187524.7:3 ENSMUST00000138978.8:4 ENSMUST00000188476.7:12 ENSMUST00000188111.7:-18 ENSMUST00000187581.7:22 ENSMUST00000137702.8:-25 ENSMUST00000137742.8:-27 AK036099:-27 ENSMUST00000055858.14:-31 NM_025880.4:-31 AK169789:-31 ENSMUST00000145653.8:435" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.