rfmm_67686.1

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Basic information about the TSS


TSS ID:rfmm_67686.1
Species:mouse
Chr:chr7
Start:44888729
End:44888744
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2055658,EM10E0848285)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF196287:189
MA431864:189
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000033063.15:190
  • NM_001290802.1:190
  • NM_001290804.1:190
  • AK154466:221
  • ENSMUST00000210078.2:248
  • ENSMUST00000211373.2:431
  • AK154250:431
  • ENSMUST00000098461.10:465
  • NM_007645.4:466
  • ENSMUST00000209779.2:490
  • AK155663:490
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-35
Nearest PromoterID:XM_006540593.5
Entrez ID:Cd37
Nearest Unigene:NM_001290804
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.066667
GC%:0.687500
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):