rfmm_68793.1

Basic information about the TSS

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TSS ID: rfmm_68793.1 Species: mouse Chr: chr7		Start: 66339664 End: 66339728 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2870501,EM10E1184908)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000128486.8:0 ENSMUST00000077967.13:0 ENSMUST00000130161.9:0 ENSMUST00000133771.9:0 AK156066:0 AK044132:0 AK012554:0 AK171170:0 BC030943:0 GeneID: 72635 HGNC/MGI_ID: MGI:1919885 UniProt_ID: D6RFA2 Q3U1D0 Q8BRI6 Nearer transcript ids and distances: BC058648:6 ENSMUST00000150071.8:-16 ENSMUST00000121777.9:-22 ENSMUST00000153007.2:-27 NM_001191001.1:-27 NM_152815.2:-27 NR_034030.1:-27 view more...

Gene_name: lines homolog 1 Gene_symbol: Lins1 Gene_synonyms: 2700083B01Rik Lins Wins2 Gene_source: MGI:1919885

TATA-Box annotation

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Distance to TSS:	13
Nearest PromoterID:	XM_030243012.2
Entrez ID:	Lins1
Nearest Unigene:	XM_011250905
Nearest Refseq:
Nearest Ensembl:
Gene Name:	lines homolog 1
Gene Alias:
Gene Type:
CpG%:	0.062500
GC%:	0.692308
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.