rfmm_69808.1

Basic information about the TSS

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TSS ID: rfmm_69808.1 Species: mouse Chr: chr7		Start: 81439175 End: 81439238 Strand: -
Source datasets	PRJDB10397|DRA000914|GSE117655
Protocol	C1CAGE|CAGE_and_CAGEscan|deepCAGE
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2875808,EM10E1187202)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000026092.9:0 ENSMUST00000142557.8:0 ENSMUST00000152620.2:0 AK014163:0 AK170168:0 AK019261:0 BC027500:0 AK018003:0 GeneID: 67290 HGNC/MGI_ID: MGI:1914540 UniProt_ID: D6RIL2 Q3TDI7 Q9CRC3 Nearer transcript ids and distances: ENSMUST00000154937.8:318

Gene_name: RIKEN cDNA 3110040N11 gene Gene_symbol: 3110040N11Rik Gene_synonyms: Gene_source: MGI:1914540

TATA-Box annotation

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Distance to TSS:	-3
Nearest PromoterID:	NM_026077.4
Entrez ID:	3110040N11Rik
Nearest Unigene:	NM_026077
Nearest Refseq:
Nearest Ensembl:
Gene Name:	RIKEN cDNA 3110040N11 gene
Gene Alias:
Gene Type:
CpG%:	0.079365
GC%:	0.656250
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.