rfmm_70276.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_70276.1
Species:mouse
Chr:chr7
Start:90125180
End:90125211
Strand:-
Source datasetsPRJDB10397|GSE117655|DRA000914
ProtocolC1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2877726,EM10E1187957)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000032843.9:0
ENSMUST00000123622.2:0
BC049680:0
AK003201:0
GeneID:68472
HGNC/MGI_ID:MGI:1915722
UniProt_ID:Q9D1R1
Nearer transcript ids and distances:
    Gene_name:transmembrane protein 126B
    Gene_symbol:Tmem126b
    Gene_synonyms:1110001A23Rik
    Gene_source:MGI:1915722



    TATA-Box annotation


    Distance to TSS:8
    Nearest PromoterID:NM_026734.2
    Entrez ID:Tmem126b
    Nearest Unigene:NM_026734
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:transmembrane protein 126B
    Gene Alias:
    Gene Type:
    CpG%:0.064516
    GC%:0.593750
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.