rfmm_71454.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_71454.1
Species:mouse
Chr:chr7
Start:104157053
End:104157063
Strand:-
Source datasetsEPD|DRA000914
ProtocolTSS_database|CAGE_and_CAGEscan
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2882141,EM10E1189864)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000071069.13:0
AK136456:0
AK164938:0
GeneID:209387
HGNC/MGI_ID:MGI:3035181
UniProt_ID:Q3TNW3
Nearer transcript ids and distances:
  • ENSMUST00000033211.14:21
  • BC056631:21
  • AF220015:74
view more...
Gene_name:tripartite motif-containing 30D
Gene_symbol:Trim30d
Gene_synonyms:TRIM30-3 Trim79
Gene_source:MGI:3035181



TATA-Box annotation


Distance to TSS:-2
Nearest PromoterID:NM_001167828.1
Entrez ID:Trim30d
Nearest Unigene:NM_001167828
Nearest Refseq:
Nearest Ensembl:
Gene Name:tripartite motif-containing 30D
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.272727
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.