rfmm_7190.1

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Basic information about the TSS


TSS ID:rfmm_7190.1
TSS ID(Version3):mm_3378.1
Species:mouse
Chr:chr1
Start:139349935
End:139350091
Strand:+
Source datasetsFANTOM5|EPD|GSE117655|DRA000914
ProtocolCAGE|TSS_database|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2293692,EM10E0944675)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000200243.5:0
GeneID:226470
HGNC/MGI_ID:MGI:2444487
UniProt_ID:A0A0G2JEJ7
Nearer transcript ids and distances:
  • ENSMUST00000039867.10:29
  • NM_172643.5:30
  • AK036544:32
view more...
Gene_name:zinc finger and BTB domain containing 41
Gene_symbol:Zbtb41
Gene_synonyms:8430415N23Rik 9830132G07Rik
Gene_source:MGI:2444487



TATA-Box annotation


Distance to TSS:85
Nearest PromoterID:XM_006529447.5
Entrez ID:Zbtb41
Nearest Unigene:XM_006529447
Nearest Refseq:
Nearest Ensembl:
Gene Name:zinc finger and BTB domain containing 41
Gene Alias:
Gene Type:
CpG%:0.153846
GC%:0.808917
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.