rfmm_72404.1

Basic information about the TSS

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TSS ID: rfmm_72404.1 Species: mouse Chr: chr7		Start: 119319966 End: 119320026 Strand: -
Source datasets	PRJDB10397|DRA000914|GSE117655
Protocol	C1CAGE|CAGE_and_CAGEscan|deepCAGE
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2886816,EM10E1191813)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000033236.9:0 ENSMUST00000209175.2:0 BC004776:0 AK152912:0 AK032078:0 AK084107:0 GeneID: 233802 HGNC/MGI_ID: MGI:2444479 UniProt_ID: Q99J36 Nearer transcript ids and distances:

Gene_name: THUMP domain containing 1 Gene_symbol: Thumpd1 Gene_synonyms: 6330575P11Rik Gene_source: MGI:2444479

TATA-Box annotation

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Distance to TSS:	2846
Nearest PromoterID:	NM_145585.3
Entrez ID:	Thumpd1
Nearest Unigene:	NM_145585
Nearest Refseq:
Nearest Ensembl:
Gene Name:	THUMP domain containing 1
Gene Alias:
Gene Type:
CpG%:	0.133333
GC%:	0.606557
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.