rfmm_73773.1

Basic information about the TSS

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TSS ID: rfmm_73773.1 Species: mouse Chr: chr7		Start: 128346661 End: 128346744 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D2890485,EM10E1193493)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000042942.10:0 ENSMUST00000206504.2:0 AK048053:0 BC098506:0 GeneID: 207352 HGNC/MGI_ID: MGI:2450915 UniProt_ID: G3X928 Q4G0C0 Nearer transcript ids and distances: ENSMUST00000205856.2:15 NM_001029982.2:-67 ENSMUST00000206986.2:400 view more...

Gene_name: Sec23 interacting protein Gene_symbol: Sec23ip Gene_synonyms: D7Ertd373e p125 Gene_source: MGI:2450915

TATA-Box annotation

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Distance to TSS:	-63
Nearest PromoterID:	XM_006507521.2
Entrez ID:	Sec23ip
Nearest Unigene:	NM_001029982
Nearest Refseq:
Nearest Ensembl:
Gene Name:	Sec23 interacting protein
Gene Alias:
Gene Type:
CpG%:	0.108434
GC%:	0.678571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.