rfmm_74632.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_74632.1
Species:mouse
Chr:chr7
Start:140436168
End:140436238
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2895001,EM10E1195218)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000210195.2:0
ENSMUST00000210157.2:0
ENSMUST00000209320.2:0
AK161239:0
AK011508:0
BC019730:0
GeneID:54399
HGNC/MGI_ID:MGI:1913128
UniProt_ID:A0A1B0GSF3 I6L979
Nearer transcript ids and distances:
  • ENSMUST00000209690.2:-6
  • ENSMUST00000211590.2:9
  • ENSMUST00000211527.2:9
  • AF003999:16
  • NM_018742.5:-58
view more...
Gene_name:Bet1 golgi vesicular membrane trafficking protein like
Gene_symbol:Bet1l
Gene_synonyms:2610021K23Rik Gs15 golgi_SNARE
Gene_source:MGI:1913128



TATA-Box annotation


Distance to TSS:93
Nearest PromoterID:NM_018742.5
Entrez ID:Bet1l
Nearest Unigene:XM_030242798
Nearest Refseq:
Nearest Ensembl:
Gene Name:Bet1 golgi vesicular membrane trafficking protein like
Gene Alias:
Gene Type:
CpG%:0.100000
GC%:0.661972
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.