rfmm_75877.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_75877.1
TSS ID(Version3):mm_70312.1
Species:mouse
Chr:chr8
Start:4288816
End:4288894
Strand:+
Source datasetsFANTOM5|EPD|PRJDB10397|GSE117655|DRA000914
ProtocolCAGE|TSS_database|C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2897694,EM10E1196652)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000003027.14:0
ENSMUST00000110999.8:0
ENSMUST00000145165.8:0
AK165184:0
BC070467:0
AF060946:0
AF060944:0
AF060945:0
AF060947:0
AK031137:0
AB005654:0
U74463:0
GeneID:26400
HGNC/MGI_ID:MGI:1346871 MGI:6121499
UniProt_ID:Q8CE90
Nearer transcript ids and distances:
  • ENSMUST00000062686.11:-55
  • AF022112:-55
  • AF022113:-55
  • ENSMUST00000110998.9:-76
  • NM_001291777.1:-76
  • NM_011944.3:-76
  • NM_001042557.2:-76
  • NM_001164172.1:-76
  • AF026216:93
view more...
Gene_name:mitogen-activated protein kinase kinase 7; predicted gene, 49320
Gene_symbol:Gm49320 Map2k7
Gene_synonyms:5930412N11Rik Jnkk2 MAP_kinase_kinase_7 MKK7 Prkmk7 sek2
Gene_source:MGI:1346871 MGI:6121499



TATA-Box annotation


Distance to TSS:115
Nearest PromoterID:NM_001291777.1
Entrez ID:Map2k7
Nearest Unigene:NM_001164172
Nearest Refseq:
Nearest Ensembl:
Gene Name:mitogen-activated protein kinase kinase 7; predicted gene, 49320
Gene Alias:
Gene Type:
CpG%:0.128205
GC%:0.721519
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.