rfmm_76129.1

Basic information about the TSS

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TSS ID: rfmm_76129.1 Species: mouse Chr: chr8		Start: 11528619 End: 11528668 Strand: -
Source datasets	FANTOM5|EPD
Protocol	CAGE|TSS_database
TSS cluster detected*	2

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D2899368,EM10E1197244)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: AK163743:0 BC089570:0 AK152454:0 AK164541:0 GeneID: 19332 HGNC/MGI_ID: MGI:102789 UniProt_ID: Q5FW79 Nearer transcript ids and distances: AK145566:-7 ENSMUST00000033900.7:-42 BC051569:-42 LF297541:93 MA533118:93 LF204636:120 MA440213:120 AB232614:120 X80332:120 M79310:120 AK217678:175 LF297542:-261 MA533119:-261 LF202803:-330 MA438380:-330 view more...

Gene_name: RAB20, member RAS oncogene family Gene_symbol: Rab20 Gene_synonyms: D8Ertd350e Gene_source: MGI:102789

TATA-Box annotation

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Distance to TSS:	-3
Nearest PromoterID:	NM_011227.2
Entrez ID:	Rab20
Nearest Unigene:	NM_011227
Nearest Refseq:
Nearest Ensembl:
Gene Name:	RAB20, member RAS oncogene family
Gene Alias:
Gene Type:
CpG%:	0.081633
GC%:	0.580000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.