rfmm_76359.1
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5|DRA000914 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE|CAGE_and_CAGEscan | |||||||||||||
| TSS cluster detected* | 2 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | PLS,CTCF-bound (EM10D2900186,EM10E1197606) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 21 |
|---|---|
| Nearest PromoterID: | XM_036153708.1 |
| Entrez ID: | Dcun1d2 |
| Nearest Unigene: | XM_030243217 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae) |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.121951 |
| GC%: | 0.595238 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "BC052676:-260 ENSMUST00000204673.2:-268 AK040130:-268 ENSMUST00000110840.8:-269 ENSMUST00000110839.10:-270 NM_001024504.2:-270 NM_001042651.1:-270 NM_001042649.1:-270 NM_001042650.1:-270 AK154550:-273 ENSMUST00000110838.8:-275 ENSMUST00000203963.2:349 AK043246:349 AK034639:375" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.