rfmm_76432.1

Basic information about the TSS

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TSS ID: rfmm_76432.1 Species: mouse Chr: chr8		Start: 13835621 End: 13835661 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2900477,EM10E1197759)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000211724.2:0 ENSMUST00000211643.2:0 AK033239:0 AK011127:0 AK166277:0 AK016053:0 AK145471:0 GeneID: 67031 HGNC/MGI_ID: MGI:1914281 UniProt_ID: Q8CCF7 Q9CUH6 Nearer transcript ids and distances: ENSMUST00000043767.9:-6 NM_025924.2:-6 BC116988:-6 BC119035:-6 AK020823:-9 LF297756:158 MA533333:158 view more...

Gene_name: UPF3 regulator of nonsense transcripts homolog A (yeast) Gene_symbol: Upf3a Gene_synonyms: 2600001C03Rik 4930546M19Rik RENT3A UPF3 Gene_source: MGI:1914281

TATA-Box annotation

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Distance to TSS:	26
Nearest PromoterID:	NM_025924.2
Entrez ID:	Upf3a
Nearest Unigene:	NM_025924
Nearest Refseq:
Nearest Ensembl:
Gene Name:	UPF3 regulator of nonsense transcripts homolog A (yeast)
Gene Alias:
Gene Type:
CpG%:	0.125000
GC%:	0.682927
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.