rfmm_80123.1

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Basic information about the TSS


TSS ID:rfmm_80123.1
Species:mouse
Chr:chr8
Start:84185036
End:84185046
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2140470,EM10E0882670)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001039137.3:11
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000212849.2:16
  • BC147069:18
  • ENSMUST00000081506.11:58
  • AK002521:58
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:14
Nearest PromoterID:XM_011248448.4
Entrez ID:Scoc
Nearest Unigene:NM_001039137
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.100000
GC%:0.727273
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):