rfmm_80513.1

Basic information about the TSS

TSS ID:	rfmm_80513.1
TSS ID(Version3):	mm_76405.1
Species:	mouse
Chr:	chr8

Start:	85573416
End:	85573541
Strand:	-

Source datasets

FANTOM5|EPD|DRA000914|GSE117655|PRJDB10397

Protocol

CAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE

TSS cluster detected^*

5

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000128028.2:0 ENSMUST00000125998.2:0 X14926:0 BC003453:0 AK160197:0 M92988:0 AK075605:0 EU639407:0 AK136191:0
GeneID:	12317
HGNC/MGI_ID:	MGI:88252
UniProt_ID:	B2MWM9 Q3UWP8
Nearer transcript ids and distances:	NM_007591.3:-19 ENSMUST00000003912.7:-22 LF197086:-68 MA432663:-68 AK193603:450 AK196213:450 LF301256:483 MA536833:483 view more...

Gene_name:	calreticulin
Gene_symbol:	Calr
Gene_synonyms:	CRT Calregulin
Gene_source:	MGI:88252

TATA-Box annotation

Distance to TSS:	82
Nearest PromoterID:	NM_007591.3
Entrez ID:	Calr
Nearest Unigene:	NM_007591
Nearest Refseq:
Nearest Ensembl:
Gene Name:	calreticulin
Gene Alias:
Gene Type:
CpG%:	0.104000
GC%:	0.611111
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):	73(CGTCTTAAAAGG,-,0.00),74(GTCTTAAAAGGC,+,0.00),75(TCTTAAAAGGCC,+,0.00)

TSS expression

Expression data not found.