rfmm_80724.1

Basic information about the TSS

---

TSS ID: rfmm_80724.1 Species: mouse Chr: chr8		Start: 86567601 End: 86567657 Strand: +
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

---

Description:	PLS,CTCF-bound (EM10D2919126,EM10E1204997)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

---

Nearest transcript id and distance: ENSMUST00000160611.8:0 ENSMUST00000053771.14:0 ENSMUST00000159882.8:0 ENSMUST00000161850.8:0 AK089493:0 BC053105:0 AK165815:0 AK084687:0 GeneID: 102093 HGNC/MGI_ID: MGI:97578 UniProt_ID: E0CX43 E0CZ55 Q3TMP9 Q7TSH2 Nearer transcript ids and distances: ENSMUST00000159716.8:-13 AK188623:-141 view more...

Gene_name: phosphorylase kinase beta Gene_symbol: Phkb Gene_synonyms: Gene_source: MGI:97578

TATA-Box annotation

---

Distance to TSS:	12
Nearest PromoterID:	NM_001364412.1
Entrez ID:	Phkb
Nearest Unigene:	XM_036153698
Nearest Refseq:
Nearest Ensembl:
Gene Name:	phosphorylase kinase beta
Gene Alias:
Gene Type:
CpG%:	0.089286
GC%:	0.789474
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.