rfmm_81682.1

Basic information about the TSS

TSS ID:	rfmm_81682.1
TSS ID(Version3):	mm_73317.1 mm_172554.1 mm_73316.1
Species:	mouse
Chr:	chr8

Start:	105951803
End:	105951879
Strand:	+

Source datasets

DRA000914|GSE117655|PRJDB10397

Protocol

CAGE_and_CAGEscan|deepCAGE|C1CAGE

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2924779,EM10E1207173)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000156561.8:0 ENSMUST00000141957.8:0 AK156120:0 BC057919:0 AK166937:0 AK051965:0
GeneID:	234678
HGNC/MGI_ID:	MGI:2443049
UniProt_ID:	D6RCI5 Q3TKL5
Nearer transcript ids and distances:	ENSMUST00000124113.8:20 BC066141:20 BC066826:20 ENSMUST00000034361.10:-26 BC006874:58 AK197005:156 view more...

Gene_name:	phagosome assembly factor 1
Gene_symbol:	Phaf1
Gene_synonyms:	D230025D16Rik Lin10
Gene_source:	MGI:2443049

TATA-Box annotation

Distance to TSS:	22
Nearest PromoterID:	NM_145604.3
Entrez ID:	D230025D16Rik
Nearest Unigene:	XM_036153967
Nearest Refseq:
Nearest Ensembl:
Gene Name:	phagosome assembly factor 1
Gene Alias:
Gene Type:
CpG%:	0.052632
GC%:	0.649351
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.