rfmm_81683.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 154 |
|---|---|
| Nearest PromoterID: | NM_145604.3 |
| Entrez ID: | D230025D16Rik |
| Nearest Unigene: | XM_036153967 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | phagosome assembly factor 1 |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.000000 |
| GC%: | 0.555556 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AK197005:58 ENSMUST00000124113.8:-70 BC066141:-70 BC066826:-70 ENSMUST00000156561.8:-131 ENSMUST00000141957.8:-131 AK166937:-131 AK051965:-131 BC057919:-138 NM_145604.3:-150 NM_001379098.1:-150 NR_166493.1:-150 NR_166491.1:-150 NR_166492.1:-150 AK041176:-150 AK156120:-150 ENSMUST00000034361.10:-192" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.