rfmm_81724.1

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Basic information about the TSS


TSS ID:rfmm_81724.1
TSS ID(Version3):mm_76849.1
Species:mouse
Chr:chr8
Start:106052839
End:106052910
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|PRJDB10397|GSE117655
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2924879,EM10E1207234)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000209964.2:0
ENSMUST00000070508.8:0
ENSMUST00000210801.2:0
ENSMUST00000211199.2:0
ENSMUST00000210412.2:0
AK148120:0
AK170400:0
AK041606:0
AK042435:0
BC034290:0
GeneID:234684
HGNC/MGI_ID:MGI:2443262
UniProt_ID:A0A1B0GQY9 A0A1B0GR77 F6SF53 Q3UG51 Q8K020
Nearer transcript ids and distances:
    Gene_name:F-box and leucine-rich repeat protein 9
    Gene_symbol:Fbxl9
    Gene_synonyms:A630024J02Rik FBL9 Lrrc29
    Gene_source:MGI:2443262



    TATA-Box annotation


    Distance to TSS:26
    Nearest PromoterID:NM_177449.4
    Entrez ID:Lrrc29
    Nearest Unigene:XM_030243502
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:F-box and leucine-rich repeat protein 9
    Gene Alias:
    Gene Type:
    CpG%:0.112676
    GC%:0.694444
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.