rfmm_82014.1

Basic information about the TSS

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TSS ID: rfmm_82014.1 TSS ID(Version3): mm_73476.1 Species: mouse Chr: chr8		Start: 107620249 End: 107620409 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|GSE117655|PRJDB10397
Protocol	CAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*	5

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2925756,EM10E1207746)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000212272.2:0 ENSMUST00000047629.7:0 X80434:0 BC068113:0 AK144455:0 AK146263:0 AK150862:0 AK168470:0 AK173318:0 GeneID: 21771 HGNC/MGI_ID: MGI:1096573 UniProt_ID: A0A1D5RLM4 Q3UJY3 Q8R2N2 Nearer transcript ids and distances: LF197246:-108 MA432823:-108 LF302863:170 MA538440:170 LF302861:-408 MA538438:-408 view more...

Gene_name: UTP4 small subunit processome component Gene_symbol: Utp4 Gene_synonyms: Cirh1a TEG-292 Tex292 Gene_source: MGI:1096573

TATA-Box annotation

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Distance to TSS:	57
Nearest PromoterID:	NM_001358982.1
Entrez ID:	Utp4
Nearest Unigene:	NM_011574
Nearest Refseq:
Nearest Ensembl:
Gene Name:	UTP4 small subunit processome component
Gene Alias:
Gene Type:
CpG%:	0.112500
GC%:	0.670807
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.