rfmm_84777.1

Basic information about the TSS

TSS ID:	rfmm_84777.1
Species:	mouse
Chr:	chr9

Start:	21421478
End:	21421499
Strand:	-

Source datasets

PRJDB10397|GSE117655|DRA000914

Protocol

C1CAGE|deepCAGE|CAGE_and_CAGEscan

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2939723,EM10E1214111)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000213316.2:0 ENSMUST00000214285.2:0 AK166092:0 AK133513:0 BC016568:0 AK160525:0
GeneID:	17083
HGNC/MGI_ID:	MGI:106201
UniProt_ID:	A0A1L1SU69
Nearer transcript ids and distances:	BC006715:4 ENSMUST00000213167.2:20 U41805:20 LF197450:-28 MA433027:-28 BC138499:-29 ENSMUST00000214576.2:-31 NM_010744.4:-31 NR_136912.1:-31 NR_136911.1:-31 BC138498:-31 BC145298:-31 ENSMUST00000034698.9:-49 NM_001324510.1:288 view more...

Gene_name:	transmembrane p24 trafficking protein 1
Gene_symbol:	Tmed1
Gene_synonyms:	Il1rl1l Ly84l St2l
Gene_source:	MGI:106201

TATA-Box annotation

Distance to TSS:	42
Nearest PromoterID:	NR_136911.1
Entrez ID:	Tmed1
Nearest Unigene:	NM_001324510
Nearest Refseq:
Nearest Ensembl:
Gene Name:	transmembrane p24 trafficking protein 1
Gene Alias:
Gene Type:
CpG%:	0.095238
GC%:	0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.