rfmm_85022.1

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Basic information about the TSS


TSS ID:rfmm_85022.1
Species:mouse
Chr:chr9
Start:24685573
End:24685587
Strand:-
Source datasetsFANTOM5|EPD|DRA000914
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2940965,EM10E1214657)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000052946.12:0
ENSMUST00000217597.2:0
AK052389:0
AK052155:0
GeneID:57246
HGNC/MGI_ID:MGI:1888496
UniProt_ID:Q9ES03
Nearer transcript ids and distances:
  • ENSMUST00000166018.4:-12
  • NM_194263.2:-12
  • NM_020496.3:-12
  • NM_001205085.1:-12
  • AF260557:-12
  • AF306667:36
  • AK141251:205
  • BC140331:429
  • BC148728:429
  • AJ277486:432
view more...
Gene_name:T-box 20
Gene_symbol:Tbx20
Gene_synonyms:9430010M06Rik Tbx12
Gene_source:MGI:1888496



TATA-Box annotation


Distance to TSS:19
Nearest PromoterID:NM_020496.3
Entrez ID:Tbx20
Nearest Unigene:NM_020496
Nearest Refseq:
Nearest Ensembl:
Gene Name:T-box 20
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.466667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.